Testsuite: org.openscience.cdk.modulesuites.MsdgTests
 Tests run: 40, Failures: 4, Errors: 1, Time elapsed: 21.579 sec
 
 ------------- Standard Output ---------------
 layout.RingPlacer#setMolecule does not have a test method
 layout.RingPlacer#getMolecule does not have a test method
 layout.RingPlacer#placeRing does not have a test method
 layout.RingPlacer#placeRing does not have a test method
 layout.RingPlacer#placeRingSubstituents does not have a test method
 layout.RingPlacer#placeSpiroRing does not have a test method
 layout.RingPlacer#placeFusedRing does not have a test method
 layout.RingPlacer#allPlaced does not have a test method
 layout.RingPlacer#checkAndMarkPlaced does not have a test method
 layout.RingPlacer#partitionNonRingPartners does not have a test method
 layout.RingPlacer#getNativeRingRadius does not have a test method
 layout.RingPlacer#getRingCenterOfFirstRing does not have a test method
 layout.RingPlacer#placeConnectedRings does not have a test method
 layout.RingPlacer#getAtomPlacer does not have a test method
 layout.RingPlacer#setAtomPlacer does not have a test method
 layout.RingPlacer did not have a TestClass annotation
 layout.HydrogenPlacer#placeHydrogens2D does not have a test method
 layout.HydrogenPlacer#placeHydrogens2D does not have a test method
 layout.HydrogenPlacer#placeHydrogens2D does not have a test method
 layout.HydrogenPlacer did not have a TestClass annotation
 layout.StructureDiagramGenerator#generateCoordinates does not have a test method
 layout.StructureDiagramGenerator#generateCoordinates does not have a test method
 layout.StructureDiagramGenerator#setUseTemplates does not have a test method
 layout.StructureDiagramGenerator#setMolecule does not have a test method
 layout.StructureDiagramGenerator#setMolecule does not have a test method
 layout.StructureDiagramGenerator#getMolecule does not have a test method
 layout.StructureDiagramGenerator#getUseTemplates does not have a test method
 layout.StructureDiagramGenerator#setTemplateHandler does not have a test method
 layout.StructureDiagramGenerator#getTemplateHandler does not have a test method
 layout.StructureDiagramGenerator#generateExperimentalCoordinates does not have a test method
 layout.StructureDiagramGenerator#generateExperimentalCoordinates does not have a test method
 layout.StructureDiagramGenerator#setBondLength does not have a test method
 layout.StructureDiagramGenerator#getOtherBondAtom does not have a test method
 layout.StructureDiagramGenerator did not have a TestClass annotation
 layout.TemplateHandler#getTemplateCount does not have a test method
 layout.TemplateHandler#mapTemplates does not have a test method
 layout.TemplateHandler#addMolecule does not have a test method
 layout.TemplateHandler#removeMolecule does not have a test method
 layout.TemplateHandler#getMappedSubstructures does not have a test method
 layout.TemplateHandler#mapTemplateExact does not have a test method
 layout.TemplateHandler#loadTemplates does not have a test method
 layout.TemplateHandler#getTemplateAt does not have a test method
 layout.TemplateHandler did not have a TestClass annotation
 layout.OverlapResolver#getAtomOverlapScore does not have a test method
 layout.OverlapResolver#resolveOverlap does not have a test method
 layout.OverlapResolver#getOverlapScore does not have a test method
 layout.OverlapResolver#getBondOverlapScore does not have a test method
 layout.OverlapResolver#displace does not have a test method
 layout.OverlapResolver#areIntersected does not have a test method
 layout.OverlapResolver did not have a TestClass annotation
 layout.AtomPlacer#setMolecule does not have a test method
 layout.AtomPlacer#getMolecule does not have a test method
 layout.AtomPlacer#allPlaced does not have a test method
 layout.AtomPlacer#populatePolygonCorners does not have a test method
 layout.AtomPlacer#partitionPartners does not have a test method
 layout.AtomPlacer#markNotPlaced does not have a test method
 layout.AtomPlacer#distributePartners does not have a test method
 layout.AtomPlacer#listNumbers does not have a test method
 layout.AtomPlacer#listNumbers does not have a test method
 layout.AtomPlacer#placeLinearChain does not have a test method
 layout.AtomPlacer#getNextBondVector does not have a test method
 layout.AtomPlacer#getInitialLongestChain does not have a test method
 layout.AtomPlacer#getLongestUnplacedChain does not have a test method
 layout.AtomPlacer#breadthFirstSearch does not have a test method
 layout.AtomPlacer#listPlaced does not have a test method
 layout.AtomPlacer#markPlaced does not have a test method
 layout.AtomPlacer#getPlacedAtoms does not have a test method
 layout.AtomPlacer#getDegreeSum does not have a test method
 layout.AtomPlacer#calculateWeights does not have a test method
 layout.AtomPlacer#getWeightNumbers does not have a test method
 layout.AtomPlacer#shouldBeLinear does not have a test method
 layout.AtomPlacer did not have a TestClass annotation
 ------------- ---------------- ---------------
 Testcase: testCoverage(org.openscience.cdk.coverage.SdgCoverageTest):	FAILED
 The sdg module is not fully tested! Missing number of method tests: 72 in number of classes: 6
 junit.framework.AssertionFailedError: The sdg module is not fully tested! Missing number of method tests: 72 in number of classes: 6
 	at org.openscience.cdk.coverage.CoverageAnnotationTest.runCoverageTest(CoverageAnnotationTest.java:83)
 	at org.openscience.cdk.coverage.SdgCoverageTest.testCoverage(SdgCoverageTest.java:41)
 
 
 Testcase: testBug2843445NaNCoords(org.openscience.cdk.layout.StructureDiagramGeneratorTest):	Caused an ERROR
 test timed out after 5000 milliseconds
 java.lang.Exception: test timed out after 5000 milliseconds
 
 
 Testcase: testResolveOverlap1(org.openscience.cdk.layout.OverlapResolverTest):	FAILED
 
 junit.framework.AssertionFailedError: 
 	at org.openscience.cdk.layout.OverlapResolverTest.testResolveOverlap1(OverlapResolverTest.java:79)
 
 
 Testcase: testOtherElements(org.openscience.cdk.layout.TemplateHandlerTest):	FAILED
 
 junit.framework.AssertionFailedError: 
 	at org.openscience.cdk.layout.TemplateHandlerTest.testOtherElements(TemplateHandlerTest.java:95)
 
 
 Testcase: testOtherBondOrder(org.openscience.cdk.layout.TemplateHandlerTest):	FAILED
 
 junit.framework.AssertionFailedError: 
 	at org.openscience.cdk.layout.TemplateHandlerTest.testOtherBondOrder(TemplateHandlerTest.java:109)