Testsuite: org.openscience.cdk.modulesuites.MsmilesTests
Tests run: 184, Failures: 4, Errors: 2, Time elapsed: 5.285 sec
------------- Standard Output ---------------
io.SMILESWriter#setWriter does not have a test method
io.SMILESWriter#setWriter does not have a test method
io.SMILESWriter#writeMoleculeSet does not have a test method
io.SMILESWriter#writeMolecule does not have a test method
io.SMILESWriter#write does not have a test method
io.SMILESWriter refers to a non-existing test class: org.openscience.cdk.io.SMILESWriterTest
io.iterator.IteratingSMILESReader#next does not have a test method
io.iterator.IteratingSMILESReader#setReader has a test method annotation 'testSetReader_InputStream' which is not found in test class: org.openscience.cdk.io.iterator.IteratingSMILESReaderTest
io.iterator.IteratingSMILESReader#close has a test method annotation 'testClose' which is not found in test class: org.openscience.cdk.io.iterator.IteratingSMILESReaderTest
smiles.DeduceBondSystemTool#isOK does not have a test method
smiles.DeduceBondSystemTool#setInterrupted does not have a test method
smiles.DeduceBondSystemTool#isInterrupted does not have a test method
smiles.SmilesGenerator#createSMILES does not have a test method
smiles.SmilesGenerator#createSMILES does not have a test method
smiles.SmilesGenerator#isValidDoubleBondConfiguration does not have a test method
smiles.SmilesGenerator#setRings does not have a test method
smiles.SmilesGenerator#getRingFinder does not have a test method
smiles.SmilesGenerator#setRingFinder does not have a test method
Cannot percieve atom type for the 2th atom: N
------------- ---------------- ---------------
Testcase: testCoverage(org.openscience.cdk.coverage.SmilesCoverageTest): FAILED
The smiles module is not fully tested! Missing number of method tests: 21 in number of classes: 4
junit.framework.AssertionFailedError: The smiles module is not fully tested! Missing number of method tests: 21 in number of classes: 4
at org.openscience.cdk.coverage.CoverageAnnotationTest.runCoverageTest(CoverageAnnotationTest.java:83)
at org.openscience.cdk.coverage.SmilesCoverageTest.testCoverage(SmilesCoverageTest.java:43)
Testcase: xtestQuinone(org.openscience.cdk.smiles.DeduceBondSystemToolTest): FAILED
expected:<SINGLE> but was:<DOUBLE>
junit.framework.AssertionFailedError: expected:<SINGLE> but was:<DOUBLE>
at org.openscience.cdk.smiles.DeduceBondSystemToolTest.xtestQuinone(DeduceBondSystemToolTest.java:130)
Testcase: testPyrrole3(org.openscience.cdk.smiles.SmilesParserTest): FAILED
The SMILES string 'n1cccc1' is invalid but no exception was thrown.
junit.framework.AssertionFailedError: The SMILES string 'n1cccc1' is invalid but no exception was thrown.
at org.openscience.cdk.smiles.SmilesParserTest.testPyrrole3(SmilesParserTest.java:1508)
Testcase: testImidazole3(org.openscience.cdk.smiles.SmilesParserTest): FAILED
The SMILES string 'n1cncc1' is invalid but no exception was thrown.
junit.framework.AssertionFailedError: The SMILES string 'n1cncc1' is invalid but no exception was thrown.
at org.openscience.cdk.smiles.SmilesParserTest.testImidazole3(SmilesParserTest.java:1600)
Testcase: testSFBug1014344(org.openscience.cdk.smiles.SmilesGeneratorTest): Caused an ERROR
expected:<[[H]C1(CCCCC(C)C)(CCC(O)C(=C)CC1(CC(=O)O)])> but was:<[O=C(O)CC1CC(=C)C(O)CCC1([H])(CCCCC(C)C])>
at org.openscience.cdk.smiles.SmilesGeneratorTest.testSFBug1014344(SmilesGeneratorTest.java:723)
Testcase: testSFBug1014344_1(org.openscience.cdk.smiles.SmilesGeneratorTest): Caused an ERROR
expected:<[CC(C)CCCCC1([H]])(CCC(O)C(=C)CC1(CC(...> but was:<[[H]C1(CCCCC(C)C])(CCC(O)C(=C)CC1(CC(...>
at org.openscience.cdk.smiles.SmilesGeneratorTest.testSFBug1014344_1(SmilesGeneratorTest.java:801)